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- Running `bedtools genomecov` failed · Issue #131 · BigDataBiology ...
- GitHub - arq5x/bedtools2: bedtools - the swiss army knife for genome ...
- bedtools coverage cannot deal with some sorted genome · Issue #964 ...
- bedtools closest reports all overlapping features · Issue #939 · arq5x ...
- issue using bedtools merge and bedtools maskfasta · Issue #624 · arq5x ...
- bedtools 'merge' skips chromosome 20 · Issue #748 · arq5x/bedtools2 ...
- has inconsistent naming convention for record · Issue #1016 · arq5x ...