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- [Feature Request] Option to choose between MMSeqs2 and Diamond? · Issue ...
- Feature request: mmseqs createhdf · Issue #524 · soedinglab/MMseqs2 ...
- running cdhit2 clustering with mmseq2 · Issue #734 · soedinglab/MMseqs2 ...
- Clustering substrings · Issue #794 · soedinglab/MMseqs2 · GitHub
- Speed up huge protein sequences clustering · Issue #623 · soedinglab ...
- Convert BLAST databases to mmseq2 databases · Issue #47 · soedinglab ...
- Hierarchical clustering with different min-seq-id values · Issue #700 ...